Cancer-miRNA Regulatory Network

Compendium of miRNA Target Genes

Download FIRM

Citation

Coenzyme Catabolic Process (GO:0009109) Genes Targeted by hsa-mir-642a in CA Colon Graudens Cluster 17 Table contains all genes in the CA Colon Graudens cluster number 17. If a gene harbors a predicted miRNA binding site by one of the three inference methods it is displayed in the final column: M = Weeder-miRvestigator predicted site, P = PITA predicted site and T = TargetScan predicted site. Entrez ID Symbol Description hsa-mir-642a GO:0009109 10469 TIMM44 translocase of inner mitochondrial membrane 44 homolog (yeast) [Source:HGNC Symbol;Acc:17316] zzz999 4729 NDUFV2 NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa [Source:HGNC Symbol;Acc:7717] zzz999 54733 SLC35F2 solute carrier family 35, member F2 [Source:HGNC Symbol;Acc:23615] zzz999 54566 EPB41L4B erythrocyte membrane protein band 4.1 like 4B [Source:HGNC Symbol;Acc:19818] P T 51100 SH3GLB1 SH3-domain GRB2-like endophilin B1 [Source:HGNC Symbol;Acc:10833] T 84749 USP30 ubiquitin specific peptidase 30 [Source:HGNC Symbol;Acc:20065] zzz999 5721 PSME2 proteasome (prosome, macropain) activator subunit 2 (PA28 beta) [Source:HGNC Symbol;Acc:9569] zzz999 7385 UQCRC2 ubiquinol-cytochrome c reductase core protein II [Source:HGNC Symbol;Acc:12586] zzz999 4715 NDUFB9 NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 9, 22kDa [Source:HGNC Symbol;Acc:7704] zzz999 1152 CKB creatine kinase, brain [Source:HGNC Symbol;Acc:1991] zzz999 84722 PSRC1 proline/serine-rich coiled-coil 1 [Source:HGNC Symbol;Acc:24472] zzz999 23258 DENND5A DENN/MADD domain containing 5A [Source:HGNC Symbol;Acc:19344] P T 1500 CTNND1 catenin (cadherin-associated protein), delta 1 [Source:HGNC Symbol;Acc:2515] zzz999 25994 HIGD1A HIG1 hypoxia inducible domain family, member 1A [Source:HGNC Symbol;Acc:29527] zzz999 201254 STRA13 stimulated by retinoic acid 13 homolog (mouse) [Source:HGNC Symbol;Acc:11422] zzz999 6717 SRI sorcin [Source:HGNC Symbol;Acc:11292] zzz999 11079 RER1 RER1 retention in endoplasmic reticulum 1 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:30309] zzz999 256302 zzz999 zzz999 T 2764 GMFB glia maturation factor, beta [Source:HGNC Symbol;Acc:4373] T 10901 DHRS4 dehydrogenase/reductase (SDR family) member 4 [Source:HGNC Symbol;Acc:16985] zzz999 10284 SAP18 Sin3A-associated protein, 18kDa [Source:HGNC Symbol;Acc:10530] zzz999 4798 NFRKB nuclear factor related to kappaB binding protein [Source:HGNC Symbol;Acc:7802] zzz999 650 BMP2 bone morphogenetic protein 2 [Source:HGNC Symbol;Acc:1069] zzz999 8801 SUCLG2 succinate-CoA ligase, GDP-forming, beta subunit [Source:HGNC Symbol;Acc:11450] zzz999 Yes 80150 ASRGL1 asparaginase like 1 [Source:HGNC Symbol;Acc:16448] zzz999 8772 FADD Fas (TNFRSF6)-associated via death domain [Source:HGNC Symbol;Acc:3573] zzz999 113444 C1orf212 chromosome 1 open reading frame 212 [Source:HGNC Symbol;Acc:25154] zzz999 1977 EIF4E eukaryotic translation initiation factor 4E [Source:HGNC Symbol;Acc:3287] zzz999 83641 FAM107B family with sequence similarity 107, member B [Source:HGNC Symbol;Acc:23726] zzz999 79961 DENND2D DENN/MADD domain containing 2D [Source:HGNC Symbol;Acc:26192] zzz999 5828 PEX2 peroxisomal biogenesis factor 2 [Source:HGNC Symbol;Acc:9717] zzz999 4634 MYL3 myosin, light chain 3, alkali; ventricular, skeletal, slow [Source:HGNC Symbol;Acc:7584] zzz999 771 CA12 carbonic anhydrase XII [Source:HGNC Symbol;Acc:1371] T 10449 ACAA2 acetyl-CoA acyltransferase 2 [Source:HGNC Symbol;Acc:83] zzz999 27069 GHITM growth hormone inducible transmembrane protein [Source:HGNC Symbol;Acc:17281] zzz999 483 ATP1B3 ATPase, Na+/K+ transporting, beta 3 polypeptide [Source:HGNC Symbol;Acc:806] zzz999 2271 FH fumarate hydratase [Source:HGNC Symbol;Acc:3700] zzz999 Yes 10775 POP4 processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae) [Source:HGNC Symbol;Acc:30081] zzz999 4711 NDUFB5 NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa [Source:HGNC Symbol;Acc:7700] zzz999 84336 TMEM101 transmembrane protein 101 [Source:HGNC Symbol;Acc:28653] T 7103 TSPAN8 tetraspanin 8 [Source:HGNC Symbol;Acc:11855] zzz999 51 ACOX1 acyl-CoA oxidase 1, palmitoyl [Source:HGNC Symbol;Acc:119] T 3587 IL10RA interleukin 10 receptor, alpha [Source:HGNC Symbol;Acc:5964] zzz999 11261 zzz999 Calcium-binding protein p22 [Source:UniProtKB/Swiss-Prot;Acc:Q99653] T 4905 NSF N-ethylmaleimide-sensitive factor [Source:HGNC Symbol;Acc:8016] zzz999 121053 C12orf45 chromosome 12 open reading frame 45 [Source:HGNC Symbol;Acc:28628] zzz999 51155 HN1 hematological and neurological expressed 1 [Source:HGNC Symbol;Acc:14569] T 10140 TOB1 transducer of ERBB2, 1 [Source:HGNC Symbol;Acc:11979] P T 26017 FAM32A family with sequence similarity 32, member A [Source:HGNC Symbol;Acc:24563] zzz999 1350 COX7C cytochrome c oxidase subunit VIIc [Source:HGNC Symbol;Acc:2292] zzz999 84057 MND1 meiotic nuclear divisions 1 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:24839] zzz999 84187 TMEM164 transmembrane protein 164 [Source:HGNC Symbol;Acc:26217] zzz999 8802 SUCLG1 succinate-CoA ligase, alpha subunit [Source:HGNC Symbol;Acc:11449] zzz999 Yes 2071 ERCC3 excision repair cross-complementing rodent repair deficiency, complementation group 3 (xeroderma pigmentosum group B complementing) [Source:HGNC Symbol;Acc:3435] zzz999 26355 FAM162A family with sequence similarity 162, member A [Source:HGNC Symbol;Acc:17865] zzz999 6945 MLX MAX-like protein X [Source:HGNC Symbol;Acc:11645] zzz999 830 CAPZA2 capping protein (actin filament) muscle Z-line, alpha 2 [Source:HGNC Symbol;Acc:1490] P T 57003 CCDC47 coiled-coil domain containing 47 [Source:HGNC Symbol;Acc:24856] zzz999 521 ATP5I ATP synthase, H+ transporting, mitochondrial Fo complex, subunit E [Source:HGNC Symbol;Acc:846] zzz999 284361 C19orf63 chromosome 19 open reading frame 63 [Source:HGNC Symbol;Acc:27609] zzz999 5236 PGM1 phosphoglucomutase 1 [Source:HGNC Symbol;Acc:8905] T 5720 PSME1 proteasome (prosome, macropain) activator subunit 1 (PA28 alpha) [Source:HGNC Symbol;Acc:9568] zzz999 6390 SDHB succinate dehydrogenase complex, subunit B, iron sulfur (Ip) [Source:HGNC Symbol;Acc:10681] zzz999 Yes

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.